Insertion junction: CLIP2.052401_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052401
Chromosome:chromosome 11
Location:3537597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477800 HDA10 (1 of 1) PTHR10625//PTHR10625:SF119 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCTGGGCGGTGGACTCGAGCCAAACTTTGATGGAACGAAGTTTGCAT
Internal bar code:CGCTGGGTCGTGCGGAGTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1195
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCAAGGGCAGCTACGAC
Suggested primer 2:CACCAAGCAACACAGCACTC