Insertion junction: CLIP2.052408_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052408
Chromosome:chromosome 11
Location:3819937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479383 (1 of 1) IPR000104//IPR013122 - Antifreeze protein, type I // Polycystin cation channel, PKD1/PKD2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTAAACGTGGACAGTTCGTATAGTTCGTGGAAAATATGGAGACAGGA
Internal bar code:CAGAACTATACACTTCCAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5670
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTAGCCTGCCTTTTGCT
Suggested primer 2:AATCCCGGTGCATTAAGCCA