Insertion junction: CLIP2.052411_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052411
Chromosome:plastome
Location:191158
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGGACTTGAACCTACGACCAATCGGTTAACAGCCGATCGCTCTACCA
Internal bar code:TCTTTTCGTGGACCTTGTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:43
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAAGAGCACAGCAACGTG
Suggested primer 2:CCCCTTCGGGCAAGTAAACT