Insertion junction: CLIP2.052419_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052419
Chromosome:chromosome 15
Location:3345658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801794 (1 of 1) IPR000477//IPR002156//IPR010998//IPR012337//IPR023109 - Reverse transcriptase domain // Ribonuclease H domain // Integrase, Lambda-type, N-terminal // Ribonuclease H-like domain // Integrase/recombinase, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGCAACCCCAGCTGTTTGCGCAACTAGCGGCGCGCTGGGGCCACGAA
Internal bar code:ACTAGTGTTGTTAATTTGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1753
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTACAGGCGGGGTACAGGTA
Suggested primer 2:GCAAGCACGCGTTCTATCAG