Insertion junction: CLIP2.052424_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052424
Chromosome:chromosome 2
Location:7920816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145550 (1 of 1) PTHR13144//PTHR13144:SF0 - TEX261 PROTEIN // PROTEIN TEX261 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGGAACTAGGCGTGCTGGGTAAACGTCGTTTAGCGCGCCCAGGGTG
Internal bar code:TCCGGGGCGTGGAAAGCAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:413
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGTCGGGCTGTACTACC
Suggested primer 2:ACCAAGAAGCATACAGGCCC