Insertion junction: CLIP2.052430_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052430
Chromosome:chromosome 6
Location:5424135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285700 (1 of 1) PTHR13466:SF0 - PROTEIN F55C12.5, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCTGCCGCCGTGGCGCAGAGACTGTTGCGCCAGGAGCGAAGGCGGC
Internal bar code:GGGCTTACCCCGCCGAGGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:535
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCACGACTTGGTCTGGA
Suggested primer 2:CGAACAGGTACAGGGTGGTC