Insertion junction: CLIP2.052433_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052433
Chromosome:chromosome 7
Location:6135579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACGCCGTCATGTCGCATGGTGCCGTGGTTTCCGTTGCCACTCCACCC
Internal bar code:ACTAAGAGTTCCGATCGGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1455
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCACTCGTACTGGAGGTA
Suggested primer 2:AGCTACGCACATCCAAACGA