Insertion junction: CLIP2.052437_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052437
Chromosome:chromosome 17
Location:5927283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741950 BBS1 Bardet-Biedl syndrome-1 associated protein; (1 of 1) K16746 - Bardet-Biedl syndrome 1 protein (BBS1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACATAGAAATGCTCGTTGCACAACCCGCATCGCAACTCCCGTTCCC
Internal bar code:TTTGCGGGTTAGTGCGGTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4939
LEAP-Seq percent confirming:96.6292
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCATAGGCGAACGGGAC
Suggested primer 2:ATCTTCCCCACGTGTGTGTC