Insertion junction: CLIP2.052437_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052437
Chromosome:chromosome 17
Location:5927284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741950 BBS1 Bardet-Biedl syndrome-1 associated protein; (1 of 1) K16746 - Bardet-Biedl syndrome 1 protein (BBS1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCGGTTCAAGCGTCCCCTGGGCCTGCTCCCCGCGCCTGCTCCCTACA
Internal bar code:CAACGTACGTCCCTAGGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1182
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTCCCCACGTGTGTGTC
Suggested primer 2:TATGCATAGGCGAACGGGAC