Insertion junction: CLIP2.052439_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052439
Chromosome:chromosome 12
Location:3448666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497450 FAP412 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype; Flagellar Associated Protein 412 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGATGCCTCACAAACCTGGACATATCAAATAACCCAATCACAAGCAT
Internal bar code:TATAGATGTGTATATTAGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1043
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTTGTTAGCCCCAGCA
Suggested primer 2:CGGGTGGATCGATAACCAGG