Insertion junction: CLIP2.052442_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052442
Chromosome:chromosome 6
Location:5497027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286450 (1 of 1) PTHR22847//PTHR22847:SF489 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCTGTGGGTGGGGCTGGACGAGTGCGTGCTTGCCTACGAGCTGGACA
Internal bar code:GGGGCTAGGTGTTGAAGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3808
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCATGGTCCAAGCATCA
Suggested primer 2:TGTACTGTAGCACGCGTTGT