Insertion junction: CLIP2.052446_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052446
Chromosome:chromosome 2
Location:8144694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144002 PUS20 (1 of 2) 5.4.99.24 - 23S rRNA pseudouridine(955/2504/2580) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCCCTTGTGCTTTCCTGGCACGCCGCCCCCCCTCCACCCCGCCCGCA
Internal bar code:GCTTATAATTCTGGTCAGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:999
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGCCGCCTCTTTCATCA
Suggested primer 2:CCATCTCCCACCACCTTCAC