Insertion junction: CLIP2.052452_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052452
Chromosome:chromosome 11
Location:593635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00185915

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACGTTATCAGCGCCTTGCTCTAAAAGAGAAGAAAGCTCCTGCTGCTAG
Internal bar code:CTCGGGTTGAAGCCTCAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:337
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCTCCAAGCCCTAAACC
Suggested primer 2:CAACGGCCATCACTTACCCT