Insertion junction: CLIP2.052452_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052452
Chromosome:chromosome 11
Location:599269
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00185915

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGCTGCAGCGGCAGGGGTGTTTTCCTTGCTGTCTGGTTGGCCTGCTG
Internal bar code:CTGCAGTGATTGTAGTGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:3.0303
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGGCCATCACTTACCCT
Suggested primer 2:AAGCCTCCAAGCCCTAAACC