Insertion junction: CLIP2.052454_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052454
Chromosome:chromosome 13
Location:4946448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605800 (1 of 1) PTHR11544:SF59 - COLD SHOCK-LIKE PROTEIN CSPF-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTCTTGTTGATGGCACCTTGTCATGCGCTATCACCAGAAGGCTTTGC
Internal bar code:GGGTATCCAGAGTCCAGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2101
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGTTGCTGTTGCTGCT
Suggested primer 2:CGGCTGCTGCTAACATGAAC