Insertion junction: CLIP2.052473_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052473
Chromosome:chromosome 9
Location:2052531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396500 HAD3 Halo-acid dehalogenase-like hydrolase; (1 of 98) IPR023214 - HAD-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGCAAGTAAAGATGGCAGATAATACTAAGCGGATCGTGTTCAGTGAC
Internal bar code:GCAGAGGACCGGGGGAAACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2009
LEAP-Seq percent confirming:65.5172
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTTAACGTGTGTGGGC
Suggested primer 2:TGCGTGCGATCTTGACTTCT