Insertion junction: CLIP2.052484_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052484
Chromosome:chromosome 17
Location:4575980
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731850 SDR29 Short-chain dehydrogenase/reductase; (1 of 1) 1.3.1.34 - 2,4-dienoyl-CoA reductase (NADPH) / 4-enoyl-CoA reductase (NADPH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCCCTGGCACACCCGCCCACACACCGTAATATGCGAGCGCCAACAC
Internal bar code:GGCATTGTCTGGGTCCGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1368
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAGCCTACTCAGCTAGC
Suggested primer 2:CGTTCGCAGCGGATACAAAG