Insertion junction: CLIP2.052488_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052488
Chromosome:chromosome 13
Location:111757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562550 ARH1 (1 of 1) 1.18.1.6 - Adrenodoxin-NADP(+) reductase / Nicotinamide adenine dinucleotide phosphate-adrenodoxin reductase; NADP adrenodoxin-like ferredoxin reductase intron
lncRNA_TCONS_00017110 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCTCAATGGCGCCCAAGCCCGGCTCCTCTGTCAACACGCGCTCGACT
Internal bar code:TAGTCTCGAGGTTTTCCAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:882
LEAP-Seq percent confirming:47.3684
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGTCGTACTGCCAACAC
Suggested primer 2:CTATCCACGTCTCCTTCCGC