Insertion junction: CLIP2.052488_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052488
Chromosome:chromosome 13
Location:111762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562550 ARH1 (1 of 1) 1.18.1.6 - Adrenodoxin-NADP(+) reductase / Nicotinamide adenine dinucleotide phosphate-adrenodoxin reductase; NADP adrenodoxin-like ferredoxin reductase intron
lncRNA_TCONS_00017110 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAGGAAGCGGTCCAGACCCTTCTGAAAGGACTGATAGAAAGCTTGTA
Internal bar code:TCGATTTCCATAGGAAGCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1035
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTATCCACGTCTCCTTCCGC
Suggested primer 2:TCCAGTCGTACTGCCAACAC