Insertion junction: CLIP2.052492_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052492
Chromosome:chromosome 13
Location:4196654
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g591501 PUS2 (1 of 2) PTHR11142:SF0 - TRNA PSEUDOURIDINE SYNTHASE-LIKE 1; RNA pseudouridine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAGCGCCCCTCTGCATCTCCCTTGCCACCTCCCTTGCTGCCAGTTGC
Internal bar code:GGAGCGGTCGAGAGCCGTCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCATTGCTTGGCTGAT
Suggested primer 2:TGAACAAAACGGCAGCATGG