Insertion junction: CLIP2.052501_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052501
Chromosome:chromosome 12
Location:300858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485500 (1 of 1) PTHR11757:SF12 - PROLYL ENDOPEPTIDASE-LIKE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCAACGCAATTTTCTACGATTCCCATGATCGCAGCTGGATGGAAGC
Internal bar code:ATGGCTGGCGTAAATTGACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CATCATGTCGCTCCTCCTCC
Suggested primer 2:TGAGATTGGGCAGTGCGATT