Insertion junction: CLIP2.052503_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052503
Chromosome:chromosome 3
Location:3966484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171300 GYX1 (1 of 1) 1.1.3.15 - (S)-2-hydroxy-acid oxidase / Hydroxy-acid oxidase B; Glycolate oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGCAGCAGCTGCGGCCCGATCTGCTGCACGCTGCTGCAGCCTGCCAG
Internal bar code:TGAGTAGTGTATTATTCTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3747
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCAACCATGGTAGGCT
Suggested primer 2:TTCTATGATGCCGCGGTCTC