Insertion junction: CLIP2.052513_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052513
Chromosome:chromosome 13
Location:1812916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575101 (1 of 726) IPR011009 - Protein kinase-like domain 5'UTR
Cre13.g801523 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTCAACCACAGCTCTCAAAGAGTAGCTGGACCTTAGAGCTCCCCGAA
Internal bar code:AGCTTTGTGGGAAGGTCGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2368
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGAGAGCCCTGTCGTT
Suggested primer 2:TGGCCTGTTGCTGGTAGAAG