Insertion junction: CLIP2.052514_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052514
Chromosome:chromosome 6
Location:3716773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCACCCGCGACACGCTCACACACCCACACACCCACATACGCTGACAG
Internal bar code:GGGAATTTCATCATGTAATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5026
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTGGCAGCAAATTGACC
Suggested primer 2:ATGTTGGTTTCTGCACGCAC