Insertion junction: CLIP2.052516_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052516
Chromosome:chromosome 2
Location:5970938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118250 SWB1 SWIB domain-containing protein; (1 of 1) K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAATGCTGACTCGCCTTCGCTTTGCTGCGTCCTGTGTGACCGTCTAC
Internal bar code:CTCGTCAGTTAGTTGATGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1122
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCCCTACCGTCTAGTCC
Suggested primer 2:CCATGAATTCGCAGCTGAGC