Insertion junction: CLIP2.052532_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052532
Chromosome:chromosome 3
Location:2317262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157950 (1 of 1) IPR011989//IPR011990//IPR016024 - Armadillo-like helical // Tetratricopeptide-like helical domain // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTAGAACCGAAAACCGTCGGTAGCATTGTGCATCCTCTCCCCCTGGCC
Internal bar code:AGAGTCTGCTAGGATGTGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6554
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGTGCAGCATGTGTAGG
Suggested primer 2:TCGTCCTCCGATACCACCTT