Insertion junction: CLIP2.052538_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052538
Chromosome:chromosome 6
Location:540641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g252401 NMDA1 (1 of 1) PTHR23291//PTHR23291:SF50 - BAX INHIBITOR-RELATED // PROTEIN LIFEGUARD 4; Conserved protein of unknown function CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCAGACCGGCCGCGTGCCGGGGCCGCTCGAATGCGCTGGCCATCTGT
Internal bar code:GTATTCGCGGACACAGCGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3131
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTAATTCCGGCTGTGTGG
Suggested primer 2:CTGGATGCGCATTACACAGC