Insertion junction: CLIP2.052544_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052544
Chromosome:chromosome 12
Location:8871322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546200 RBL5 Rhomboid-like protein; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGTGCCTGGCGCCCTTCGCCTTCGCCGCCACCACCGGCAGGTGGGCG
Internal bar code:CGTTGTTCGGCGGTTCTAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2469
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGGCAAGCTTCATCTTT
Suggested primer 2:CAGCAGTTGTGGGTTGTTCG