Insertion junction: CLIP2.052551_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052551
Chromosome:chromosome 6
Location:2920268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273150 RRM4 (1 of 2) 2.1.1.166 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase / Um2552 methyltransferase; Putative ribosomal RNA methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGAATGGCTCTACCGCGTGGAGCTGGACTGGGTCGTCCAGCGCGTGTG
Internal bar code:GGGCAGGTTCAGCGTAGTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1559
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTCCTTCTTGGCATCTT
Suggested primer 2:CTGCCGCGAGTTTGTATTCG