Insertion junction: CLIP2.052561_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052561
Chromosome:chromosome 16
Location:5827682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679900 XRN3 5' to 3' exoribonuclease; (1 of 1) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTAATCGCGGGACACGTAAAGCAAGGCAGTACATAAGCTATGGGACCC
Internal bar code:CCGTCCCCGTACTGAGAGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:884
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCACCTCCATACCTCCA
Suggested primer 2:TCCTTCCATCTCCTCCCCTG