Insertion junction: CLIP2.052566_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052566
Chromosome:chromosome 3
Location:7519765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205350 EXN8 (1 of 7) IPR002562//IPR012337 - 3'-5' exonuclease domain // Ribonuclease H-like domain; 3'-5' exonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCACCGACGCCGCCACCGACGCCGCTGCCGCTGCCACCCCGCGGACG
Internal bar code:TCACGGATCGCTTCTATTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2561
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATGCCAGGCTACGCTTA
Suggested primer 2:CTGCATCGCACCCTGCTATA