Insertion junction: CLIP2.052566_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052566
Chromosome:chromosome 3
Location:7519780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205350 EXN8 (1 of 7) IPR002562//IPR012337 - 3'-5' exonuclease domain // Ribonuclease H-like domain; 3'-5' exonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTGGGATACGGCGTTGCGGCAGGCGGCTGCAGCTGTGGCGGCGGCGG
Internal bar code:GGGTCTGGGGGGAGTGGCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4727
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATCGCACCCTGCTATA
Suggested primer 2:GCTATGCCAGGCTACGCTTA