Insertion junction: CLIP2.052573_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052573
Chromosome:chromosome 3
Location:3723050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169000 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCAGAGACATGCGGTTTCACCTTTCCCAGTCACGCTGGCGGGCCAGAA
Internal bar code:ATACTTCGCGCTGGAATCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2125
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATCGATGGCTTACCTGG
Suggested primer 2:TACCCTGCAGGATGGCATTG