Insertion junction: CLIP2.052574_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052574
Chromosome:chromosome 14
Location:2481198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGTGGTGGGCGTGGTGGGCGGCGGTGGCGCCGGCGGCGAGGCCCTTG
Internal bar code:CTGCGGGGTTCCTCCTAGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:924
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGTTACCGGACTGGACA
Suggested primer 2:TGGTATTTACAACCCCCGCC