Insertion junction: CLIP2.052575_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052575
Chromosome:chromosome 4
Location:2775449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223700 (1 of 2) K07735 - putative transcriptional regulator (algH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACAGGAGGACCAGCGTGCGTACGCGGCACAGCACAAGCTGCTTAGTT
Internal bar code:GAGGTTCAAGATGTGGCCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2499
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGGCATCATCCTGAACC
Suggested primer 2:TGCACGCAGTTTTGTAACCG