Insertion junction: CLIP2.052577_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052577
Chromosome:chromosome 13
Location:4048652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590700 (1 of 4) PTHR16255//PTHR16255:SF4 - UNCHARACTERIZED // SPORULATION PROTEIN RMD8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAAGGCAAGCAGTGTGTGTTGATCACAACAAAGCAATCGAGTGCGCGC
Internal bar code:GTCAGGTGCCTGCCATAGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGCTGGAAACGTGAC
Suggested primer 2:CAGGTCGAGGAACTGCTGTT