Insertion junction: CLIP2.052585_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052585
Chromosome:chromosome 9
Location:6268790
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g413800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGTTTGGCTATGTGGCTGTGGAGACCGACCCCGTGGCTGTGTCAGAG
Internal bar code:CCCCGGCGCACGTTTGCTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:884
LEAP-Seq percent confirming:6.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AACCAGTCGGCTGAGACAAG
Suggested primer 2:CAATTCGCATGTTGCCACCA