Insertion junction: CLIP2.052585_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052585
Chromosome:chromosome 16
Location:1029877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649150 (1 of 1) PF13414//PF13920 - TPR repeat (TPR_11) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTAGGGACGGCTTGATTGACCTTTGCACTGTGTGGTACGCGACGGGT
Internal bar code:GATCGGGTAACGGTGTTAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1115
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCAACAACCTCCGTCTG
Suggested primer 2:GTGGTTGAGGATGGCAGTGA