Insertion junction: CLIP2.052587_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052587
Chromosome:chromosome 2
Location:3403581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098550 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCACATTCGGCGTCTGTCAAGAAGGAGCACGCAGGAACGGTACAACGG
Internal bar code:GAGTACGTCTAAGATGCACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTGGCTTTGTTAAACCA
Suggested primer 2:TCCAACCGTGGTCAAGTAGC