Insertion junction: CLIP2.052588_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052588
Chromosome:chromosome 9
Location:2403783
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393700 MMP3 Matrix metalloproteinase; (1 of 2) IPR016517 - Peptidase M11, autolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCTCCAGATCTGTGCCCTCCCACCCACCTCCTTCTGCTCGGTCTGC
Internal bar code:TACTTTCAACTATGATCTAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1711
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTGCAACTGACTCATCA
Suggested primer 2:CTTGGCAACCTCCTGCAAAC