Insertion junction: CLIP2.052588_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052588
Chromosome:chromosome 9
Location:2403785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393700 MMP3 Matrix metalloproteinase; (1 of 2) IPR016517 - Peptidase M11, autolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGAGAGCCTGCTGCACGCCGTGTGAAACCACGCGGCCCATGCGATGGC
Internal bar code:AAACTGGGCTAGGCCTGGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:352
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCAACCTCCTGCAAAC
Suggested primer 2:AGCGTGCAACTGACTCATCA