Insertion junction: CLIP2.052593_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052593
Chromosome:chromosome 3
Location:8029823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCTCTACCCCACGCCCCAACCCCCACCCCGCAGGCCAGCTGGCCCAG
Internal bar code:GGCTCCGGGGCAGGGTTCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3603
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTTCTTTGCCTTGCCCG
Suggested primer 2:CACGAGCAAGCTAAATCGGC