Insertion junction: CLIP2.052593_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052593
Chromosome:chromosome 3
Location:8029846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAAAGCGAGATACGGTAGAGCGGGGGCGCAAGTGAGGCACTAGCGGG
Internal bar code:TCAATTTCCACCTGGCCTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:974
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAGCAAGCTAAATCGGC
Suggested primer 2:GTTCTTCTTTGCCTTGCCCG