Insertion junction: CLIP2.052595_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052595
Chromosome:chromosome 15
Location:960491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639600 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGGAAGTGCTCGCGGCCTGCGAGCAAAGCGAAGGCGAGCCGCCCGGC
Internal bar code:TGTTTTGTATCTTTTGCTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:881
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAGGGAAGGGAGGTCTA
Suggested primer 2:GTGAACTCAACCAACGGCAC