Insertion junction: CLIP2.052604_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052604
Chromosome:chromosome 10
Location:4946181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454000 (1 of 2) IPR000157//IPR016024 - Toll/interleukin-1 receptor homology (TIR) domain // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACCAGGCTGTGCTTGCAGTCCAGCGCCGCCGCCAGCGGGTTGGGCGG
Internal bar code:GATGGGGACAGCTGAGAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2120
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCCGTGTGACTTCTGTG
Suggested primer 2:CGATTTGAGGAGGTCGAGGG