Insertion junction: CLIP2.052608_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052608
Chromosome:chromosome 3
Location:5954506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189100 (1 of 1) PTHR31606:SF1 - WBP2 ORTHOLOG, ISOFORM E intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCTGCGCAGCGGGAGCACCCAGCCGCAGGGCCGGCGGGAAAGAGGTG
Internal bar code:TTCAGGGGTGAAAGGCCCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3227
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:133

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGAACATGTTAGCGCG
Suggested primer 2:TGCCCAGGAACCACATGATC