Insertion junction: CLIP2.052608_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052608
Chromosome:chromosome 3
Location:5954721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189100 (1 of 1) PTHR31606:SF1 - WBP2 ORTHOLOG, ISOFORM E intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGTTGGCGAACGTGCGCACCAGCGCCGGGTTCGCCGTCATTCTGGAA
Internal bar code:TTTAGCTACTTAGGGATAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1947
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCAGGAACCACATGATC
Suggested primer 2:CGAAGGAACATGTTAGCGCG