Insertion junction: CLIP2.052609_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052609
Chromosome:chromosome 13
Location:2579130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580600 ATT1,ATE1 Arginyl-tRNA protein transferase; (1 of 1) 2.3.2.8 - Arginyltransferase / Arginyl-tRNA--protein transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCCCTGCCGTCCCTCCTCTTGCCATCCCTCCCCTGCCGTCCCTCCT
Internal bar code:GACAATTGTATGGATAAGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:942
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACTCACACACACGT
Suggested primer 2:CAACAGTTTCGTCCCCGAGA