Insertion junction: CLIP2.052623_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052623
Chromosome:chromosome 1
Location:5701692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCACATAGCCAGACGGTGGTAATCACGCACCCTGCACCAAGTTATCTA
Internal bar code:GTAGTTTCCCACCTTACGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1758
LEAP-Seq percent confirming:97.2727
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCCATGACTGTCAGCTT
Suggested primer 2:GCGGCTATGTTGATGCCTTG