Insertion junction: CLIP2.052623_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052623
Chromosome:chromosome 9
Location:826983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403750 HAD6 Halo-acid dehalogenase-like hydrolase; (1 of 1) PTHR12725:SF55 - F14L17.7 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATATATTGCCAAGCGCCACCAAGCGGAGCGCGGCAAGGCCCGCCCAC
Internal bar code:GTCGGTGTCTTCCTGCGGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1552
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGCACACAAGCACGAA
Suggested primer 2:CATAACAAGGTGTACGCGCG